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Sitemap
A list of all the posts and pages found on the site. For you robots out there is an XML version available for digesting as well.
Pages
About me
About me
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Posts
Future Blog Post
Published:
This post will show up by default. To disable scheduling of future posts, edit config.yml and set future: false.
Blog Post number 4
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Blog Post number 3
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Blog Post number 2
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Blog Post number 1
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
publications
Extrathymically Generated Regulatory T Cells Establish a Niche for Intestinal Border-Dwelling Bacteria and Affect Physiologic Metabolite Balance
Published in Immunity, 2018
pTreg cell deficiency led to heightened type 2 immune responses triggered by microbial exposure, which disrupted the niche of border-dwelling bacteria early during colonization.
Recommended citation: Campbell, C; Dikiy, S et al. (2018). "Extrathymically Generated Regulatory T Cells Establish a Niche for Intestinal Border-Dwelling Bacteria and Affect Physiologic Metabolite Balance" Immunity. https://doi.org/10.1016/j.immuni.2018.04.013 http://dinkystas.github.io/files/cns1.pdf
A distal Foxp3 enhancer enables interleukin-2 dependent thymic Treg cell lineage commitment for robust immune tolerance
Published in Immunity, 2021
Here, we report that IL-2 - STAT5 signaling converged on an enhancer (CNS0) during Foxp3 induction.
Recommended citation: Dikiy, S; Li, J et al. (2021). "A distal Foxp3 enhancer enables interleukin-2 dependent thymic Treg cell lineage commitment for robust immune tolerance" Immunity. https://doi.org/10.1016/j.immuni.2021.03.020 http://dinkystas.github.io/files/cns0.pdf
Terminal differentiation and persistence of effector regulatory T cells essential for the prevention of intestinal inflammation
Published in BioRxiv, 2022
Using novel genetic tools, we characterized the transcriptional programs of distinct colonic effector Treg cell types.
Recommended citation: Dikiy, S et al. (2022). "Terminal differentiation and persistence of effector regulatory T cells essential for the prevention of intestinal inflammation" BioRxiv. https://doi.org/10.1101/2022.05.16.492030 http://dinkystas.github.io/files/treg_diff.pdf
resources
RNA- and ATAC-seq analysis
Integrated analysis of paired RNA-seq and ATAC-seq datasets. Currently a bunch of hard-to-interpret scripts. I hope to put together a more intelligble, deployable version soon.
mouseR
Colony management package